Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015910658.1_cds_XP_016460679.1_54077
CDS Infomation

[gene=LOC107784123] [db_xref=GeneID:107784123] [protein=scarecrow-like protein 13] [protein_id=XP_016460679.1] [location=231270..232904] [gbkey=CDS]
Sequence

ATGTATGCATCTCAGAGACCACAAAGGTCGGGCAGTGTACATAGCTTGAACCAGCAACCA
ATGCAGCAAGTTCAGCAATACTACACTCCTTACCGTGCTTTTGACAACAGCATTTATAAC
GATAGTAGCAGCTCTGGGACACAGTTTTCTTTTCAGACACAGAATGAACAGTTCTTCACT
CTGGACTCATTGCCAGCTACTGACTACACCGTCTATGATGCAGATCCTTCCGTGAGCATC
TCTTCCAACAGGAGTCCGTTCTCTCCTCAATGTTCTCAGTCATACATGTCTGATCCACAT
CATTCCTATGATAACACTTGTGGTTCACCTGTAAGCTGGTGTTCAGGAGTTGATGATGGC
AACGGAACGAAGCATGTGCTGAGGGAACTGAAGAATAAGTTGCTAGGTCCTGACTCTGAT
ATTGATGACAGCAGCAGTTGCTCGTTCAATGGTGTAATCTCAAAACCTTCTTCCTTGATA
AAGTGGAATCAAGTATTGGACATAGCCTCCAGATTGGACTTGAAAGATCTGCTCTTTGCC
TGTGCTGAAGCAGTAGCAGAGGCTGATATCTCATCTGCAGAAGGGCTAATGAATGTCTTA
GAGGAAAGGGTATCGGTTTCTGGCGAACCAATGCAACGACTGAGTGCGTACATGCTGGAA
GGGCTAAGAGCACGGTTATTGTCCTCAGGAAGTATCATATACAAAAAACTGAAGTGCAAC
GAACCAACTAGCTCAGATTTGTTGTCTTACATGCAAGTCCTCTATCACATCTGCCCTTAC
TTCAAGTTCGCTTATATGTCCGCCAATGTCGTCATCGGGGAAGCCATGAGGAATGAGAAT
AGAATCCACATCATTGATTTTCAAATTGCACAGGGAAGTCAATGGATGTTCCTCCTTCAC
GATCTTGCTCGTCGGCCTGGTGGACCGCCATTTGTCCGCGTCACAGGCGTCGATGATTCC
CAATCAGCTCATGCACGAGGTGGAGGACTTACACTAGTCGGTGAAAGGTTAACAAAAGTT
GCCGAGTCTTGTGGAGTGCCTTTCGAATTCCATGGTGCTGCCATGTCAGGCTGTAGGGTC
GAACTAGAGAACCTGCAAGTTAGACATGGAGAAGCCCTGGCAGTTAATTTCCCTTACATG
TTGCACCACATGCCAGATGAGAGCGTAAGCACTATGAACCATAGAGATCGCCTATTAAGA
CTAGTTAAGAGCTTGTCTCCCAAAATTGTCACCCTAGTTGAACAAGAATCGAACACCAAC
ACCGCCCCTTTCCTTCCAAGGTTCCGTGAAACTCTAGATTACTATACAGCTATGTTTGAA
TCAATTGATGCAGCTCGTCCGAGGGATGACAAGCAGCGGATCAGTGCAGAGGAGCATTGT
GTTGCACGGGACATTGTCAATATAATCGCATGTGAAGGGGCCGAAAGAGTGGAAAGGCAC
GAACCATTTGGCAAGTGGAGGTCAAGACTTGTGATGGCTGGTTTTACTCCTTTCCCTTTG
AGTCCATCGGTTGGTGAGACGATCAAAGACATGTTGAAGGAGTATAGCCCAAATTATAAG
CTTGCCGAATGCCAGGAGGCGCTTTATCTTGGATGGAAGAACCGAGCTTTGGCAACTTCT
TCTGCTTGGCGATGA

Peptide Sequence

PEP ID

XP_016460679.1
PEP Infomation

PREDICTED: scarecrow-like protein 13 [Nicotiana tabacum]
Sequence

MYASQRPQRSGSVHSLNQQPMQQVQQYYTPYRAFDNSIYNDSSSSGTQFSFQTQNEQFFT
LDSLPATDYTVYDADPSVSISSNRSPFSPQCSQSYMSDPHHSYDNTCGSPVSWCSGVDDG
NGTKHVLRELKNKLLGPDSDIDDSSSCSFNGVISKPSSLIKWNQVLDIASRLDLKDLLFA
CAEAVAEADISSAEGLMNVLEERVSVSGEPMQRLSAYMLEGLRARLLSSGSIIYKKLKCN
EPTSSDLLSYMQVLYHICPYFKFAYMSANVVIGEAMRNENRIHIIDFQIAQGSQWMFLLH
DLARRPGGPPFVRVTGVDDSQSAHARGGGLTLVGERLTKVAESCGVPFEFHGAAMSGCRV
ELENLQVRHGEALAVNFPYMLHHMPDESVSTMNHRDRLLRLVKSLSPKIVTLVEQESNTN
TAPFLPRFRETLDYYTAMFESIDAARPRDDKQRISAEEHCVARDIVNIIACEGAERVERH
EPFGKWRSRLVMAGFTPFPLSPSVGETIKDMLKEYSPNYKLAECQEALYLGWKNRALATS
SAWR

Transcript Sequence

Gene sequence data has not been registered.